Pseudomonas putida GB-1, PputGB1_4984

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_4984
Name
Replicon chromosome
Genomic location 5560555 - 5562363 (- strand)

Cross-References

RefSeq YP_001671204.1
GI 167035973
Entrez 5872799
INSDC ABZ00869.1
NCBI Locus Tag PputGB1_4984
UniParc UPI0000F2466D
UniProtKB Acc B0KL33
UniProtKB ID B0KL33_PSEPG
UniRef100 UniRef100_B0KL33
UniRef50 UniRef50_Q9HUG8
UniRef90 UniRef90_Q88D92

Product

Feature Type CDS
Coding Frame 1
Product Name
lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA
Synonyms
Evidence for Translation
Charge (pH 7) -0.16
Kyte-Doolittle Hydrophobicity Value 0.146
Molecular Weight (kDa) 66387.2
Isoelectric Point (pI) 6.98

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004607 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_4984

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]
E-value: 3.8e-78
Percent Identity: 33.6
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]
E-value: 3.8e-78
Percent Identity: 33.6
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]
E-value: 3.8e-78
Percent Identity: 33.6

References

No references are associated with this feature.