Pseudomonas fluorescens SBW25, PFLU5960
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens SBW25
GCF_000009225.2|latest |
| Locus Tag |
PFLU5960
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 6516869 - 6518533 (- strand) |
Cross-References
| RefSeq | YP_002875446.1 |
| GI | 229593327 |
| Entrez | 7816747 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
putative EAL/GGDEF domain-containing protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -15.32 |
| Kyte-Doolittle Hydrophobicity Value | -0.123 |
| Molecular Weight (kDa) | 61.8 |
| Isoelectric Point (pI) | 5.29 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 452 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004870 (523 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PFLU5960
Search term: putative EAL/GGDEF domain-containing protein
|
Human Homologs
References
No references are associated with this feature.