Pseudomonas fluorescens SBW25, PFLU2720

Gene Feature Overview

Strain	Pseudomonas fluorescens SBW25 GCF_000009225.2|latest
Locus Tag	PFLU2720
Name
Replicon	chromosome
Genomic location	3001991 - 3005083 (- strand)

Cross-References

RefSeq	YP_002872303.1
GI	229590184
Entrez	7817584
INSDC	CAY48951.1
UniParc	UPI00019D9F67
UniProtKB Acc	C3KAS9
UniProtKB ID	C3KAS9_PSEFS
UniRef100	UniRef100_C3KAS9
UniRef50	UniRef50_P31224
UniRef90	UniRef90_I2BN31

Product

Feature Type	CDS
Coding Frame	1
Product Name	putative efflux system transmembrane protein
Synonyms
Evidence for Translation
Charge (pH 7)	-6.58
Kyte-Doolittle Hydrophobicity Value	0.352
Molecular Weight (kDa)	109745.3
Isoelectric Point (pI)	5.52

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AMR gene predictions from CARD database

Identified using the Resistance Gene Identifier (RGI)

Model Name	Definition	Accession	Model Type (?)	SNP	Cutoff	Bit Score	Percent Identity	CARD Version
adeF	AdeF is the membrane fusion protein of the multidrug efflux complex AdeFGH. [PMID:20696879]	ARO:3000777	protein homolog model		Strict	761.1	43.47	3.2.5

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 487 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000417 (2093 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFLU2720 Search term: putative efflux system transmembrane protein

Human Homologs

References