Pseudomonas fluorescens SBW25, PFLU2720

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Sequence Data

Strain Pseudomonas fluorescens SBW25 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
GCGAGCTGAATGATCTGCGCCGGGCCTTCCGCGCCGGCAGCTTGAAGCAGGTCGGCCAGGACCAGGCCAAAGCCACGCTGATCCAGGACGACGGCAGTCT CTACCCATTGCCGGGCAAATTGCTGTTCGCCGAGATCAGCGTCGACCCCGGCACCGGGCAGATCATCCTGCGCAGCGAATTCCCCAACCCGGACCTCGAC CTGCTGCCCGGCAGCTTTGTACGGGTGCGCCTGGAACAGGCCGTCGACAAGCAAGGCATCAGCGTGCCGCAACGCGCCATCACCCGTGACAGCGCCGGCA TTCCGATGGTGCTGCTACTGGACGCCGAGCAAACGGTGACCCAGCAACCGGTGGAGTTGGGCGCGGTGATCGAGGACCGCTGGATCGTCAGCAGCGGCCT CAAGCCCGGTGACCGTATCGTCGTCGAAGGCCTGCAACATGCGCGCCCCGGTGAAAAAGTTGAAGTGGACGCTAGCCCGTTCGTAAAGGAATAACCTGTC
DNA Sequence for Gene
>PFLU2720
ATGCCGCAGTTCTTTATTGACCGCCCGATCTTCGCCTGGGTGGTGGCCCTGTTTATCCTGCTGGCCGGCGCGCTCGCCATCCCGCAACTGCCGGTGGCGC AGTACCCCAACGTCGCGCCGCCAAAAGTCGAGATCTATGCGGTGTACCCGGGCGCTTCGGCCCAGACCCTGGACGAAAGCGTGGTCAGCCTGATCGAGCA GGAGCTCAACGGCGCCGATCACCTGCTGTATTTCGAGTCGCAGAGCAGCCTGGGCTCGGCCACCATCACCGCGACGTTCCAGCCGGGCACCAACCCGGAA ATGGCTCAGGTTGACGTGCAAAACCGCCTCAAGGCCGTGGAACCGCGCCTGCCGCAAGCGGTGACCCAGCAAGGTTTGCAGGTGGAGAAAGTCTCCGCCG GCTTCCTGCTGCTGGTGACCCTCACGTCCAACGACGGCAAGCTCGATGACGTAGCGCTCAGTGACTACCTGGCGCGCAACGTGATGAACGAGCTCAAGCG CCTGGACGGTGTGGGCAAGGCCCAGCTGTACGGTGCCGAGCGCGCCATGCGCATCTGGATCGACCCGCAGAAACTGATCGGTTTCAACCTCACCCCGGCC GATGTGAACGCCGCCATCAGCGCGCAGAACGCCCAGGTGTCTGCCGGCAGCATCGGTGATTTGCCAGGGACGAACAGCCAGGAAATCACCGCGGCGGTGC TGGTCAAGGGCCAGCTGTCGACGCCGGCCGAATTCGCCGACATCGTGCTCAAGGCCAACCCGGACGGTTCCACCGTGCGCATCGGCGACGTGGCGCGAGT GGAAGTCGGTAGCCAGGAATACCAGTTCTCCACGCGCCTGAACGGCAAACCGTCCACCGCGGTCAGCGTGCAACTATCACCGGGTGCCAACGCGCTGAAC ACTGCGACGCGGGTGCGGGCGAAGATGGACGAGTTGTCGCGCTTCTTCCCGGCCAATGTGGAATACAAGATCCCGTACGACACTTCGCCGTTCGTCAAAG TCTCGATCACCAAGGTGGTCTACACGTTGCTCGAGGCGATGGCGCTGGTGTTTGCGGTGATGTTCCTGTTCCTGCAGAACGTGCGTTACACGCTGATCCC CACGCTGGTGGTGCCGATTGCGTTGATGGGCACCTTCGCGACCATGTTGTTGCTGGGCTTTTCGATCAACGTACTGACCATGTTCGGCATGGTGTTGGCG ATCGGCATCCTGGTGGACGATGCGATCGTGGTGGTGGAGAACGTCGAGCGGATCATGGCCACCGAGGGCCTGTCGCCCAAGGACGCGACCAAGAAGGCCA TGGGCCAGATCACCGGTGCCATCGTCGGCATCACGCTGGTACTGGTGGCGGTGTTCCTGCCGATGGGGTTCATGGCGGGTTCGGTGGGGGTGATCTATCA GCAGTTCTCGCTGTCGATGGCCACCTCGATCCTGTTCTCGGCGTTCCTGGCCCTGACCCTGACCCCGGCCCTGTGCGCCACCTTGCTCAAGCCGATTGCC AAGGGCGAGCACCACGCCAAGGGCGGTTTCTTCGGCGGGTTCAACAAGCGCTTCGAACAGCTCACCGACCGCTATGAAGGCTGGGTGGCCTACGCCCTCA AGCGCAGCGGCCGCTACCTGTTGATTTACCTGATGCTGCTGGTTGGCCTGGGATGGATGTTCAGCCGCCTGCCCTCCTCGTTCCTGCCGGTGGAAGACCA GGGCTACACCATCACTGACATCCAGTTGCCTCCGGGTGCGAGCAAGAACCGCACGGTGCAGGTGGCCGAGCAGATCGAAGCGCACAACGCCGGGGAGCCT GGGGTGGGTGATACCACCATGATCATGGGGTTCAGCTTCTCCGGCTCGGGGCAGAACGCGGCGCTGGCGTTTACCACGCTCAAGGATTGGTCGGAACGCA GCAGCGATGACTCTGCGTCCTCGATTGCCGACCGTGCCAACATGGCCTTCAGCGAGCTCAAGGACGCGATCGCCTATGCGATCCTGCCGCCGCCGGTGGA TGGCCTGGGCACGTCCAGCGGCTTCGAATTCCGCTTGCAGGACCGTGGTGGTGTCGGCCATGCCGCCTTGATGGCGGCGCGCACCGAGTTGCTGGCCGCC GCCGCAAAAAGCCCGATCCTGGCCAACGTGCGCGAAAGCGCCCTGGCCGAGGCCCCGCAAGTGCAGTTGGAGGTGGACCGCAAGCAGGCCAACGCGCTGG GCGTGTCGTTTGCCGACGTCGGCAACGTGCTGTCCTCAGCCATCGGTTCGGCCTACATCAATGACTTCCCCAACCAGGGCCGCATGCAGCGGGTGGTGGT GCAGGCCGAGGGTGACCAGCGCAGCCAGGTGGCGGACTTGATGAAGATCAACGTGCGCAACAACGCCGGGAAGATGGTGCCGTTGTCGGCGTTTGTCGAA GCCAAGTGGACCCAGGGCCCGACGCAGTTGACCCGTTACAACGGCTACCCAGCCATCGCGATTTCCGGCGAAGCGGCACCGGGGCACAGCACCGGTGAGG CGATGGATGAGATCCAGCGCCTGGTCAGCCAGTTGCCGGCCGGCCTGGGCCAGGAATGGACCGGATTGTCGCTGCAGGAGCGCCTGTCCGGCGCCCAGGC ACCGTTGCTGCTCGGCCTGTCGCTGCTGATCGTGTTCCTGTGCCTGGCGGCATTGTATGAAAGCTGGTCGATTCCGACCTCGGTGTTGCTGGTGGTGCCG TTGGGCGTGCTCGGTGCGGTGGTGGCCGTCTCCTTGCGCGGCATGCCCAACGATGTGTTCTTCAAGGTCGGCTTGATCACCATCATTGGCTTGTCGGCGA AAAACGCGATCCTGATCATCGAGTTCGCCAAGGACCTGTACGACCAGGGTGAAGACCTGATCACCGCCACCTTGAAGGCTGCGCGGTTGCGCTTGCGGCC GATCATCATGACGTCCCTGGCGTTCATCCTCGGCGTGGTGCCGCTGGCGATTGCCACGGGGGCCAGCTCGGCCAGCCAGCAGGCGATCGGTACCGGGGTG ATCGGCGGGATGATCACCGCGACGCTGGCGGTGGTGTTTGTGCCGGTGTTTTTTGTGGTGGTGATGAAGCTGGTCAAAAAAGGCCCCAAGTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACACAGGTAAAATGTGGGAGGGGCCTTGCCCCCGATGACCATAGGCATCTACACAACGCTGTAGCAACCACGCTAACCACGATGCGAAGCGAGTCGCTGT TGATCTTGATCTTGACCCTGCTTTTGATCTCAGGCGCCCCGTCAAACACGCTGGCCGGAATTCGACAGGGATTTGGGGGGTAAACCGGCAGGGATGCCGG TTTAGCCGCCCCGCGCCATGGATGGCGCGTGGCGGCGGCCCCCCAAATACCTGTCGGATTACGGGCACACCGAGCGTGAGCGAGGTGCCGAGTGTTGGGG CAAGAGCCTTTTGGTTACTTTTGGGCTCCTTTCAAAAGTGACCCGCCGTAAGGGCGGAACCCATACCAACCGTTACCTAAATAACGGATATGTACCCGGT CTGATCCAACATCCTGGTCGTCTGCCAGGCCGCCACGGGAGCAAGCTCCCTCGCCACAGGTCCGACGCCATACCCAGAATTGTGTAGCAGTCACCTGATG
Amino Acid Sequence
>putative efflux system transmembrane protein
MPQFFIDRPIFAWVVALFILLAGALAIPQLPVAQYPNVAPPKVEIYAVYPGASAQTLDESVVSLIEQELNGADHLLYFESQSSLGSATITATFQPGTNPE MAQVDVQNRLKAVEPRLPQAVTQQGLQVEKVSAGFLLLVTLTSNDGKLDDVALSDYLARNVMNELKRLDGVGKAQLYGAERAMRIWIDPQKLIGFNLTPA DVNAAISAQNAQVSAGSIGDLPGTNSQEITAAVLVKGQLSTPAEFADIVLKANPDGSTVRIGDVARVEVGSQEYQFSTRLNGKPSTAVSVQLSPGANALN TATRVRAKMDELSRFFPANVEYKIPYDTSPFVKVSITKVVYTLLEAMALVFAVMFLFLQNVRYTLIPTLVVPIALMGTFATMLLLGFSINVLTMFGMVLA IGILVDDAIVVVENVERIMATEGLSPKDATKKAMGQITGAIVGITLVLVAVFLPMGFMAGSVGVIYQQFSLSMATSILFSAFLALTLTPALCATLLKPIA KGEHHAKGGFFGGFNKRFEQLTDRYEGWVAYALKRSGRYLLIYLMLLVGLGWMFSRLPSSFLPVEDQGYTITDIQLPPGASKNRTVQVAEQIEAHNAGEP GVGDTTMIMGFSFSGSGQNAALAFTTLKDWSERSSDDSASSIADRANMAFSELKDAIAYAILPPPVDGLGTSSGFEFRLQDRGGVGHAALMAARTELLAA AAKSPILANVRESALAEAPQVQLEVDRKQANALGVSFADVGNVLSSAIGSAYINDFPNQGRMQRVVVQAEGDQRSQVADLMKINVRNNAGKMVPLSAFVE AKWTQGPTQLTRYNGYPAIAISGEAAPGHSTGEAMDEIQRLVSQLPAGLGQEWTGLSLQERLSGAQAPLLLGLSLLIVFLCLAALYESWSIPTSVLLVVP LGVLGAVVAVSLRGMPNDVFFKVGLITIIGLSAKNAILIIEFAKDLYDQGEDLITATLKAARLRLRPIIMTSLAFILGVVPLAIATGASSASQQAIGTGV IGGMITATLAVVFVPVFFVVVMKLVKKGPK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site