Pseudomonas fluorescens SBW25, PFLU0088 (algB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU0088
Name
algB
Replicon chromosome
Genomic location 89512 - 90858 (- strand)

Cross-References

RefSeq YP_002869785.1
GI 229587666
Entrez 7820045
INSDC CAY46373.1
UniParc UPI00019D9B85
UniProtKB Acc C3K6T8
UniProtKB ID C3K6T8_PSEFS
UniRef100 UniRef100_C3K6T8
UniRef50 UniRef50_P23747
UniRef90 UniRef90_Q88AQ2

Product

Feature Type CDS
Coding Frame 1
Product Name
alginate biosynthesis transcriptional regulatory protein
Synonyms
Evidence for Translation
Charge (pH 7) -7.47
Kyte-Doolittle Hydrophobicity Value -0.235
Molecular Weight (kDa) 49.6
Isoelectric Point (pI) 5.40

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 618 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005023 (531 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU0088
Search term: algB

Human Homologs

References

No references are associated with this feature.