Pseudomonas fluorescens Pf0-1, Pfl01_3077

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_3077
Name
Replicon chromosome
Genomic location 3520782 - 3522209 (+ strand)

Cross-References

RefSeq YP_348806.1
GI 77459299
Entrez 3712764
INSDC ABA74815.1
NCBI Locus Tag Pfl01_3077
UniParc UPI00003879A6
UniProtKB Acc Q3KBN9
UniProtKB ID Q3KBN9_PSEPF
UniRef100 UniRef100_Q3KBN9
UniRef50 UniRef50_G8Q7L2
UniRef90 UniRef90_G8Q7L2

Product

Feature Type CDS
Coding Frame 1
Product Name
sigma54 specific transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -4.58
Kyte-Doolittle Hydrophobicity Value -0.141
Molecular Weight (kDa) 52226.2
Isoelectric Point (pI) 5.82

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003271 (473 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_3077

Human Homologs

References

No references are associated with this feature.