Pseudomonas sp. GM30, PMI25_003419

Gene Feature Overview

Strain	Pseudomonas sp. GM30 GCF_000282275.2|latest
Locus Tag	PMI25_003419
Name
Replicon	ctg10
Genomic location	120048 - 121109 (+ strand)

Cross-References

RefSeq	WP_007966678.1
GI	495241915
INSDC	EUB87979.1
NCBI Locus Tag	PMI25_003419
UniParc	UPI0002702D4A
UniProtKB Acc	W6VUM1
UniProtKB ID	W6VUM1_9PSED
UniRef100	UniRef100_W6VUM1
UniRef50	UniRef50_Q88NK4
UniRef90	UniRef90_Q3KH18

Product

Feature Type	CDS
Coding Frame	1
Product Name	DNA polymerase IV
Synonyms
Evidence for Translation
Charge (pH 7)	2.75
Kyte-Doolittle Hydrophobicity Value	-0.299
Molecular Weight (kDa)	39.5
Isoelectric Point (pI)	7.86

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000889 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PMI25_003419 Search term: DNA polymerase IV

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000377091 REV1 DNA directed polymerase [Source:HGNC Symbol;Acc:HGNC:14060] E-value: 6.9e-40 Percent Identity: 30.1
Ensembl 110, assembly GRCh38.p14	ENSP00000258428 REV1 DNA directed polymerase [Source:HGNC Symbol;Acc:HGNC:14060] E-value: 6.9e-40 Percent Identity: 30.1

References