Pseudomonas sp. GM30, PMI25_001001

Gene Feature Overview

Strain	Pseudomonas sp. GM30 GCF_000282275.2|latest
Locus Tag	PMI25_001001
Name
Replicon	ctg3
Genomic location	86190 - 88181 (- strand)

Cross-References

RefSeq	WP_007969511.1
GI	495244748
INSDC	EUB84624.1
NCBI Locus Tag	PMI25_001001
UniParc	UPI0002701D17
UniProtKB Acc	W6VJQ1
UniProtKB ID	W6VJQ1_9PSED
UniRef100	UniRef100_W6VJQ1
UniRef50	UniRef50_O52325
UniRef90	UniRef90_Q4KC82

Product

Feature Type	CDS
Coding Frame	1
Product Name	bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase
Synonyms
Evidence for Translation
Charge (pH 7)	-1.39
Kyte-Doolittle Hydrophobicity Value	-0.250
Molecular Weight (kDa)	74.1
Isoelectric Point (pI)	6.83

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002112 (427 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PMI25_001001 Search term: bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000387019 UDP-glucuronate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:17729] E-value: 3.7e-26 Percent Identity: 25.1
Ensembl 110, assembly GRCh38.p14	ENSP00000283148 UDP-glucuronate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:17729] E-value: 3.7e-26 Percent Identity: 25.1

References