Pseudomonas sp. GM30, PMI25_002252

Gene Feature Overview

Strain	Pseudomonas sp. GM30 GCF_000282275.2|latest
Locus Tag	PMI25_002252
Name
Replicon	ctg6
Genomic location	156523 - 157788 (- strand)

Cross-References

RefSeq	WP_007960801.1
GI	495236031
INSDC	EUB83591.1
NCBI Locus Tag	PMI25_002252
UniParc	UPI000270030F
UniProtKB Acc	W6VFD0
UniProtKB ID	W6VFD0_9PSED
UniRef100	UniRef100_W6VFD0
UniRef50	UniRef50_G3XD58
UniRef90	UniRef90_A0A0B7DIT7

Product

Feature Type	CDS
Coding Frame	1
Product Name	sugar ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	-6.43
Kyte-Doolittle Hydrophobicity Value	-0.199
Molecular Weight (kDa)	47.1
Isoelectric Point (pI)	5.98

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001312 (602 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PMI25_002252 Search term: sugar ABC transporter ATP-binding protein

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000269080 ATP binding cassette subfamily A member 8 [Source:HGNC Symbol;Acc:HGNC:38] E-value: 3.3e-20 Percent Identity: 28.9
Ensembl 110, assembly GRCh38.p14	ENSP00000467271 ATP binding cassette subfamily A member 8 [Source:HGNC Symbol;Acc:HGNC:38] E-value: 3.3e-20 Percent Identity: 28.9
Ensembl 110, assembly GRCh38.p14	ENSP00000402814 ATP binding cassette subfamily A member 8 [Source:HGNC Symbol;Acc:HGNC:38] E-value: 3.3e-20 Percent Identity: 28.9

References