Pseudomonas sp. GM30, PMI25_002252

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM30 ctg6, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AATCTGCTGAAGAAAATCAGCTTCCCGCGCATCTGCCTGCCGGTGATTGCGCTGCTCAACGCCGGGATCAACTTCGCGATCATTCTCGCGCTGTTCTTCG GTTTTCTGCTGATCAGCGGGCGCCTGCCCGGCATGGCCTTGCTGGCGCTGATTCCGCTGTTGCTGGTGCAGGTGATCTTCGCCGCCGGGCTGGGGATGAT CCTCGGCATTCTCAACGTGTTCTTCCGCGATGTCGGGCAGATGTTCGGCATCTGCCTGCAGTTCTGGTTCTGGCTGACACCGATCGTTTACCCGCTCTCG ATCCTGCCGCCGGGCATCCAGCACCTGATCAGCCTCAACCCGATGACGGCACTGATGACCAGTTACCAGAACGTGTTCCTCTACAACCAGTGGCCGGACT GGTCGTCACTGCTGCCGTTGCTGATCCTCGGCCTGCTGTTCTGCGCCATGGCCCTGCGCCTGTTCCGGCAACGTGTCGGCGAAATGGTGGATGAACTCTG
DNA Sequence for Gene
>PMI25_002252
ATGGGACATATACGCGTCAGCGGCCTGGGCAAGGCCTACAAGCAATACCCCAATCGCTGGAGCCGGTTGTTCGAGTGGCTGGTGCCGTTTTCCGGCACCC GACACCACTTGCACTGGGTTCTGCAGGACATCGATTTCGAGATACAACCCGGTGAAGCGGTCGGCATCGTCGGGGTCAACGGCGCGGGCAAAAGCACGCT GCTGAAGATGATCACCGGCACCACGCAACCGAGTTGCGGGCAGATTCAACTGCAAGGCCGCGTCGCCGCCCTGCTGGAACTGGGCATGGGTTTCCACCCG GACTTCACCGGCCGCCAGAACGCGTTCATGGCCGGCCAGTTGCTGGGCATGCAGGTCGAAGAGATCGAAGCGCTGATGCCGCAAATCGAAAGTTTTGCCG AAATCGGCGAAGCCATCGATCACCCGGTGCGCACCTACTCCAGTGGCATGCAGATGCGCCTGGCCTTCAGCGTTGCCACCGCCCGACGTCCAGACATCCT GATCGTCGATGAAGCACTGTCGGTGGGCGACGCCTACTTCCAGCACAAAAGCTTCGAGCGCATCCGCAACTTCCGCAAGGCCGGTACCACGTTGCTGATC GTGTCCCACGACCGCTCGGCGATTCAGTCGATCTGCGACACCGCGATCCTCCTGGAGAACGGCCGCCTGGCCATGCGCGGCAAACCCGAAGAGGTCATGG ACTACTACAACGCCATGCTTGCCCAGCGCGAAGGCCAGATCGTGCGCCAGGAAATGCTCGCCAACGGCCAGGTGCAGACCATTTCCGGGACGGGTGAGGC GGGGATTGTCAGTGTGCGTCTGCTCGACGCTCAAGGACGCAATCTGGAAGTGGCGGAAGTCGGCCAGCCGGTGGTGCTGGAAGTTCAGACCGCAGTGCGC GAGGACATCGAACGGCTGGTGCTGGGCTTTCTGATCAAGGACCGCCTCGGCCAGGCGATCTACGGCATCAATACCCATCGCCAGGACCAGGCGATCAGCG ACCTGAGCGCCGGTGAGCAGGTGACGTTCCGCTTCGCCTTCGACATGCGCCTGGGCAAGGGCAGTTATTCGGTGGCGCTGAGCCTGTCGCGCCTGGATTC GCATCTGGATCGCAACTTCGAATGGCGCGATTACGGTCTGGTCTTCCACGTCATCAACAATCGTCAGGAAGACTTCGTCGGCTGCTCGTGGCTGCAAGCC CGGACCGAGATCAGCCGCTCCAGTGAAAACACCGAGCAACTACCTGACAGGGAAATCTCGCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CACGACTGTTGGTGGAGTGCACCTACGTTTTCGAACACCCGTCCGCCAACTCGGGCATTCAACGGGTAGTGCGCAACGTCATTCAACAGTTGCCCGACGC CGACCGCGAGCGTGAATGTATCCCGGTGGTGATGCTCGACGGCGCTCTGTATCAGGTTAAAAGCCTGGCGCCGATCAAAACCCCGAAAATCAATCTGACC AGCCTGCGGGTGAAGCTCGAACAATGGGCCAACGGCTTCTGGCTGCGCCATCGCGCTCTGGAACGACGCTGGCCTTTCAGCCGATCACATTTCACCCGGC GAGTGTTGTACGTACTCTGCCGACTCACCGCGTTCGCCTGTTTCAGCCTGCCGATGCGCGTGCTCGGGCGCCTGCTCAAGGGCAAGCCGGTGCCCGAGCG CTGCGTGCCATTGCAACATCAGGCCGGCGATCAACTGGTATTGCTCGACTCGTCCTGGCACGCCAACTTTTTCCCCTTGGCCGAACAACTCAAACGCGAC
Amino Acid Sequence
>sugar ABC transporter ATP-binding protein
MGHIRVSGLGKAYKQYPNRWSRLFEWLVPFSGTRHHLHWVLQDIDFEIQPGEAVGIVGVNGAGKSTLLKMITGTTQPSCGQIQLQGRVAALLELGMGFHP DFTGRQNAFMAGQLLGMQVEEIEALMPQIESFAEIGEAIDHPVRTYSSGMQMRLAFSVATARRPDILIVDEALSVGDAYFQHKSFERIRNFRKAGTTLLI VSHDRSAIQSICDTAILLENGRLAMRGKPEEVMDYYNAMLAQREGQIVRQEMLANGQVQTISGTGEAGIVSVRLLDAQGRNLEVAEVGQPVVLEVQTAVR EDIERLVLGFLIKDRLGQAIYGINTHRQDQAISDLSAGEQVTFRFAFDMRLGKGSYSVALSLSRLDSHLDRNFEWRDYGLVFHVINNRQEDFVGCSWLQA RTEISRSSENTEQLPDREISQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site