Pseudomonas sp. HPB0071, HMPREF1487_08809

Gene Feature Overview

Strain	Pseudomonas sp. HPB0071 GCF_000478505.2|latest
Locus Tag	HMPREF1487_08809
NCBI Locus Tag	HMPREF1487_RS22025
Name
Replicon	scaffold_2
Genomic location	555962 - 557557 (- strand)

Cross-References

RefSeq	WP_010798965.1
GI	498498244
INSDC	ENA28233.1
NCBI Locus Tag	HMPREF1487_RS22025
NCBI Old Locus Tag	HMPREF1487_08809
UniParc	UPI0002C97157
UniProtKB Acc	N2J356
UniProtKB ID	N2J356_9PSED
UniRef100	UniRef100_N2J356
UniRef50	UniRef50_O50078
UniRef90	UniRef90_N2J356

Product

Feature Type	CDS
Coding Frame	1
Product Name	isocitrate lyase
Synonyms
Evidence for Translation
Charge (pH 7)	-8.06
Kyte-Doolittle Hydrophobicity Value	-0.389
Molecular Weight (kDa)	59.1
Isoelectric Point (pI)	5.94

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002919 (354 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: HMPREF1487_08809 Search term: isocitrate lyase

Human Homologs

References