Pseudomonas sp. HPB0071, HMPREF1487_07630

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. HPB0071
GCF_000478505.2|latest
Locus Tag
HMPREF1487_07630
NCBI Locus TagHMPREF1487_RS16385
Name
Replicon scaffold_1
Genomic location 3515308 - 3516363 (+ strand)

Cross-References

RefSeq WP_010797799.1
GI 498497071
INSDC ENA30730.1
NCBI Locus Tag HMPREF1487_RS16385
NCBI Old Locus Tag HMPREF1487_07630
UniParc UPI0002CB3509
UniProtKB Acc N2J075
UniProtKB ID N2J075_9PSED
UniRef100 UniRef100_N2J075
UniRef50 UniRef50_P13794
UniRef90 UniRef90_N2J075

Product

Feature Type CDS
Coding Frame 1
Product Name
outer membrane porin F
Synonyms
Evidence for Translation
Charge (pH 7) -16.47
Kyte-Doolittle Hydrophobicity Value -0.479
Molecular Weight (kDa) 37.6
Isoelectric Point (pI) 4.68

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003618 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: HMPREF1487_07630

Human Homologs

References

No references are associated with this feature.