Pseudomonas sp. HPB0071, HMPREF1487_07630

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01021
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005509 calcium ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF103647
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 289 305 6.0E-19
CDD cd07185 OmpA_C-like IPR006665 OmpA-like domain 239 345 8.68653E-50
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 244 266 6.0E-19
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 274 289 6.0E-19
SUPERFAMILY SSF56925 OMPA-like IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel 42 183 1.39E-16
SUPERFAMILY SSF103647 TSP type-3 repeat IPR028974 TSP type-3 repeat 198 231 3.53E-9
Pfam PF05736 OprF membrane domain IPR008722 Outer membrane porin F, N-terminal 1 184 3.7E-85
Coils Coil Coil - - 338 351 -
Gene3D G3DSA:2.40.160.20 - - - 14 180 2.9E-45
PANTHER PTHR30329 STATOR ELEMENT OF FLAGELLAR MOTOR COMPLEX - - 220 346 1.3E-32
Pfam PF00691 OmpA family IPR006665 OmpA-like domain 244 339 2.2E-24
Gene3D G3DSA:3.30.1330.60 - IPR036737 OmpA-like domain superfamily 220 350 6.0E-42
SUPERFAMILY SSF103088 OmpA-like IPR036737 OmpA-like domain superfamily 227 344 1.96E-40

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.