Pseudomonas sp. HPB0071, HMPREF1487_05989
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas sp. HPB0071
GCF_000478505.2|latest |
| Locus Tag |
HMPREF1487_05989
|
| NCBI Locus Tag | HMPREF1487_RS08330 |
| Name |
|
| Replicon | scaffold_1 |
| Genomic location | 1749529 - 1750863 (- strand) |
Cross-References
| RefSeq | WP_010796191.1 |
| GI | 498495458 |
| NCBI Locus Tag | HMPREF1487_RS08330 |
| NCBI Old Locus Tag | HMPREF1487_05989 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
diguanylate cyclase (GGDEF) domain-containing protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -11.32 |
| Kyte-Doolittle Hydrophobicity Value | -0.195 |
| Molecular Weight (kDa) | 50.3 |
| Isoelectric Point (pI) | 5.70 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000814 (336 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: HMPREF1487_05989
|
Human Homologs
References
No references are associated with this feature.