Pseudomonas sp. P179, HMPREF1224_10602
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas sp. P179
GCF_000478485.2|latest |
| Locus Tag |
HMPREF1224_10602
|
| Name |
|
| Replicon | scaffold_1 |
| Genomic location | 5628860 - 5630569 (- strand) |
Cross-References
| RefSeq | WP_003114302.1 |
| GI | 489205250 |
| NCBI Locus Tag | HMPREF1224_10602 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
membrane protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -14.21 |
| Kyte-Doolittle Hydrophobicity Value | -0.636 |
| Molecular Weight (kDa) | 63.3 |
| Isoelectric Point (pI) | 5.13 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 5H7Y | HYDROLASE INHIBITOR/PEPTIDE | 11/21/16 | Structure of immunity protein TplEi of T6SS from Pseudomonas aeruginosa complexed with L peptide | Pseudomonas aeruginosa PAO1 | 2.195 | X-RAY DIFFRACTION | 100.0 |
| 4R1D | HYDROLASE/HYDROLASE INHIBITOR | 08/05/14 | The crystal structure of Tle4-Tli4 complex | Pseudomonas aeruginosa PAO1 | 1.749 | X-RAY DIFFRACTION | 100.0 |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003845 (309 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: HMPREF1224_10602
Search term: membrane protein
|
Human Homologs
References
No references are associated with this feature.