Pseudomonas sp. P179, HMPREF1224_07024
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas sp. P179
GCF_000478485.2|latest |
| Locus Tag |
HMPREF1224_07024
|
| Name |
|
| Replicon | scaffold_1 |
| Genomic location | 1737455 - 1738777 (- strand) |
Cross-References
| RefSeq | WP_010793353.1 |
| GI | 498492579 |
| NCBI Locus Tag | HMPREF1224_07024 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
hypothetical protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 3.55 |
| Kyte-Doolittle Hydrophobicity Value | 0.843 |
| Molecular Weight (kDa) | 47.4 |
| Isoelectric Point (pI) | 8.30 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000219 (3043 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: HMPREF1224_07024
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
solute carrier family 7 member 7 [Source:HGNC Symbol;Acc:HGNC:11065]
E-value:
1.4e-10
Percent Identity:
24.4
|
|
Ensembl
110, assembly
GRCh38.p14
|
solute carrier family 7 member 7 [Source:HGNC Symbol;Acc:HGNC:11065]
E-value:
1.4e-10
Percent Identity:
24.4
|
|
Ensembl
110, assembly
GRCh38.p14
|
solute carrier family 7 member 7 [Source:HGNC Symbol;Acc:HGNC:11065]
E-value:
1.4e-10
Percent Identity:
24.4
|
|
Ensembl
110, assembly
GRCh38.p14
|
solute carrier family 7 member 7 [Source:HGNC Symbol;Acc:HGNC:11065]
E-value:
1.4e-10
Percent Identity:
24.4
|
|
Ensembl
110, assembly
GRCh38.p14
|
solute carrier family 7 member 7 [Source:HGNC Symbol;Acc:HGNC:11065]
E-value:
1.4e-10
Percent Identity:
24.4
|
|
Ensembl
110, assembly
GRCh38.p14
|
solute carrier family 7 member 7 [Source:HGNC Symbol;Acc:HGNC:11065]
E-value:
1.4e-10
Percent Identity:
24.4
|
|
Ensembl
110, assembly
GRCh38.p14
|
solute carrier family 7 member 7 [Source:HGNC Symbol;Acc:HGNC:11065]
E-value:
1.4e-10
Percent Identity:
24.4
|
References
No references are associated with this feature.