Pseudomonas aeruginosa Stone 130, HMPREF1223_12491
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa Stone 130
GCF_000478465.2|latest |
| Locus Tag |
HMPREF1223_12491
|
| Name |
|
| Replicon | scaffold_1 |
| Genomic location | 5821083 - 5823497 (- strand) |
Cross-References
| RefSeq | WP_003119180.1 |
| GI | 489210343 |
| NCBI Locus Tag | HMPREF1223_12491 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ligand-gated channel
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -5.08 |
| Kyte-Doolittle Hydrophobicity Value | -0.277 |
| Molecular Weight (kDa) | 86.5 |
| Isoelectric Point (pI) | 6.27 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003507 (512 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: HMPREF1223_12491
Search term: ligand-gated channel
|
Human Homologs
References
No references are associated with this feature.