Pseudomonas sp. GM41(2012), PMI27_001241

Gene Feature Overview

Strain	Pseudomonas sp. GM41(2012) GCF_000282315.2|latest
Locus Tag	PMI27_001241
NCBI Locus Tag	PMI27_RS20850
Name
Replicon	ctg2
Genomic location	1118915 - 1119940 (+ strand)

Cross-References

RefSeq	WP_008149825.1
GI	495425128
INSDC	EUB75065.1
NCBI Locus Tag	PMI27_RS20850
NCBI Old Locus Tag	PMI27_001241
UniParc	UPI0002703250
UniProtKB Acc	W6V6K3
UniProtKB ID	W6V6K3_9PSED
UniRef100	UniRef100_W6V6K3
UniRef50	UniRef50_G8QBH4
UniRef90	UniRef90_J3IIQ2

Product

Feature Type	CDS
Coding Frame	1
Product Name	type VI secretion protein
Synonyms
Evidence for Translation
Charge (pH 7)	6.11
Kyte-Doolittle Hydrophobicity Value	-0.136
Molecular Weight (kDa)	37.1
Isoelectric Point (pI)	9.44

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000088 (1157 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PMI27_001241 Search term: type VI secretion protein

Human Homologs

References