Pseudomonas sp. GM41(2012), PMI27_002801

Gene Feature Overview

Strain	Pseudomonas sp. GM41(2012) GCF_000282315.2|latest
Locus Tag	PMI27_002801
NCBI Locus Tag	PMI27_RS13270
Name
Replicon	ctg3
Genomic location	267005 - 269077 (+ strand)

Cross-References

RefSeq	WP_008150099.1
GI	495425402
INSDC	EUB73058.1
NCBI Locus Tag	PMI27_RS13270
NCBI Old Locus Tag	PMI27_002801
UniParc	UPI0002705393
UniProtKB Acc	W6V1A7
UniProtKB ID	W6V1A7_9PSED
UniRef100	UniRef100_W6V1A7
UniRef50	UniRef50_Q9HYC3
UniRef90	UniRef90_A0A024EEA0

Product

Feature Type	CDS
Coding Frame	1
Product Name	type IV secretion protein Rhs
Synonyms
Evidence for Translation
Charge (pH 7)	-8.47
Kyte-Doolittle Hydrophobicity Value	-0.592
Molecular Weight (kDa)	77.4
Isoelectric Point (pI)	6.45

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000090 (3342 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PMI27_002801 Search term: type IV secretion protein Rhs

Human Homologs

References