Pseudomonas sp. GM41(2012), PMI27_004919

Gene Feature Overview

Strain	Pseudomonas sp. GM41(2012) GCF_000282315.2|latest
Locus Tag	PMI27_004919
NCBI Locus Tag	PMI27_RS02950
Name
Replicon	ctg6
Genomic location	78458 - 80563 (+ strand)

Cross-References

RefSeq	WP_008149011.1
GI	495424314
INSDC	EUB71774.1
NCBI Locus Tag	PMI27_RS02950
NCBI Old Locus Tag	PMI27_004919
UniParc	UPI000270537C
UniProtKB Acc	W6VG23
UniProtKB ID	W6VG23_9PSED
UniRef100	UniRef100_W6VG23
UniRef50	UniRef50_Q3IJ73
UniRef90	UniRef90_Q87WQ8

Product

Feature Type	CDS
Coding Frame	1
Product Name	polynucleotide phosphorylase/polyadenylase
Synonyms
Evidence for Translation
Charge (pH 7)	-15.14
Kyte-Doolittle Hydrophobicity Value	-0.018
Molecular Weight (kDa)	74.9
Isoelectric Point (pI)	5.00

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004385 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PMI27_004919 Search term: polynucleotide phosphorylase/polyadenylase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000400646 polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166] E-value: 1.6e-112 Percent Identity: 35.9
Ensembl 110, assembly GRCh38.p14	ENSP00000393953 polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166] E-value: 1.6e-112 Percent Identity: 35.9

References