Pseudomonas sp. VLB120, PVLB_24565

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_24565
Name
Replicon chromosome
Genomic location 5391292 - 5392359 (- strand)

Cross-References

RefSeq YP_008765819.1
GI 557225604
Entrez 17499552
INSDC AGZ37692.1
NCBI Locus Tag PVLB_24565
UniParc UPI0003C0AB9E
UniProtKB Acc U5VLI2
UniProtKB ID U5VLI2_9PSED
UniRef100 UniRef100_U5VLI2
UniRef50 UniRef50_G8PZD9
UniRef90 UniRef90_U5VLI2

Product

Feature Type CDS
Coding Frame 1
Product Name
RND family efflux transporter, MFP subunit
Synonyms
Evidence for Translation
Charge (pH 7) -2.30
Kyte-Doolittle Hydrophobicity Value -0.181
Molecular Weight (kDa) 38.0
Isoelectric Point (pI) 5.85

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 384 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000155 (490 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_24565

Human Homologs

References

No references are associated with this feature.