Pseudomonas sp. VLB120, PVLB_24335 (ompR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_24335
Name
ompR
Replicon chromosome
Genomic location 5343642 - 5344382 (- strand)

Cross-References

RefSeq YP_008765773.1
GI 557225558
Entrez 17499506
INSDC AGZ37646.1
NCBI Locus Tag PVLB_24335
UniParc UPI0003C077C8
UniProtKB Acc U5VPQ2
UniProtKB ID U5VPQ2_9PSED
UniRef100 UniRef100_U5VPQ2
UniRef50 UniRef50_Q3IJP0
UniRef90 UniRef90_U5VPQ2

Product

Feature Type CDS
Coding Frame 1
Product Name
osmolarity response regulator
Synonyms
Evidence for Translation
Charge (pH 7) -2.54
Kyte-Doolittle Hydrophobicity Value -0.373
Molecular Weight (kDa) 27.4
Isoelectric Point (pI) 5.50

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 625 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004784 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_24335
Search term: ompR

Human Homologs

References

No references are associated with this feature.