Pseudomonas sp. VLB120, PVLB_23845
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas sp. VLB120
GCF_000494915.1|latest |
| Locus Tag |
PVLB_23845
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 5256134 - 5257201 (+ strand) |
Cross-References
| RefSeq | YP_008765675.1 |
| GI | 557225460 |
| Entrez | 17499404 |
| NCBI Locus Tag | PVLB_23845 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
A/G-specific adenine glycosylase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 1.28 |
| Kyte-Doolittle Hydrophobicity Value | -0.295 |
| Molecular Weight (kDa) | 39781.2 |
| Isoelectric Point (pI) | 7.32 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 627 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004741 (533 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PVLB_23845
Search term: A/G-specific adenine glycosylase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
mutY DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7527]
E-value:
3.4e-55
Percent Identity:
37.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
mutY DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7527]
E-value:
3.4e-55
Percent Identity:
37.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
mutY DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7527]
E-value:
3.4e-55
Percent Identity:
37.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
mutY DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7527]
E-value:
3.4e-55
Percent Identity:
37.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
mutY DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7527]
E-value:
3.4e-55
Percent Identity:
37.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
mutY DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7527]
E-value:
3.4e-55
Percent Identity:
37.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
mutY DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7527]
E-value:
3.4e-55
Percent Identity:
37.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
mutY DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7527]
E-value:
3.4e-55
Percent Identity:
37.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
mutY DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7527]
E-value:
3.4e-55
Percent Identity:
37.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
mutY DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7527]
E-value:
3.4e-55
Percent Identity:
37.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
novel protein
E-value:
3.4e-55
Percent Identity:
37.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
mutY DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7527]
E-value:
3.4e-55
Percent Identity:
37.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
mutY DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7527]
E-value:
3.4e-55
Percent Identity:
37.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
mutY DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7527]
E-value:
3.4e-55
Percent Identity:
37.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
mutY DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7527]
E-value:
3.4e-55
Percent Identity:
37.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
mutY DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7527]
E-value:
3.4e-55
Percent Identity:
37.2
|
References
No references are associated with this feature.