Pseudomonas sp. VLB120, PVLB_23645

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_23645
Name
Replicon chromosome
Genomic location 5210430 - 5211062 (- strand)

Cross-References

RefSeq YP_008765635.1
GI 557225420
Entrez 17499364
INSDC AGZ37508.1
NCBI Locus Tag PVLB_23645
UniParc UPI0003C08791
UniProtKB Acc U5VKI4
UniProtKB ID U5VKI4_9PSED
UniRef100 UniRef100_U5VKI4
UniRef50 UniRef50_Q4K4Q0
UniRef90 UniRef90_Q1I3K0

Product

Feature Type CDS
Coding Frame 1
Product Name
sarcosine oxidase subunit gamma
Synonyms
Evidence for Translation
Charge (pH 7) -1.32
Kyte-Doolittle Hydrophobicity Value -0.160
Molecular Weight (kDa) 23.0
Isoelectric Point (pI) 6.64

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 62 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004973 (513 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_23645

Human Homologs

References

No references are associated with this feature.