Pseudomonas sp. VLB120, PVLB_22690

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_22690
Name
Replicon chromosome
Genomic location 5000897 - 5001580 (+ strand)

Cross-References

RefSeq YP_008765444.1
GI 557225229
Entrez 17499161
INSDC AGZ37317.1
NCBI Locus Tag PVLB_22690
UniParc UPI0003C086AD
UniProtKB Acc U5VKF0
UniProtKB ID U5VKF0_9PSED
UniRef100 UniRef100_U5VKF0
UniRef50 UniRef50_Q88QI8
UniRef90 UniRef90_U5VKF0

Product

Feature Type CDS
Coding Frame 1
Product Name
OmpW family protein
Synonyms
Evidence for Translation
Charge (pH 7) -6.05
Kyte-Doolittle Hydrophobicity Value 0.107
Molecular Weight (kDa) 24.0
Isoelectric Point (pI) 4.75

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 151 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001618 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_22690

Human Homologs

References

No references are associated with this feature.