Pseudomonas sp. VLB120, PVLB_22290

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_22290
Name
Replicon chromosome
Genomic location 4919171 - 4920172 (- strand)

Cross-References

RefSeq YP_008765364.1
GI 557225149
Entrez 17499081
INSDC AGZ37237.1
NCBI Locus Tag PVLB_22290
UniParc UPI0003C0688E
UniProtKB Acc U5VK69
UniProtKB ID U5VK69_9PSED
UniRef100 UniRef100_U5VK69
UniRef50 UniRef50_Q9X6V6
UniRef90 UniRef90_I7CCA9

Product

Feature Type CDS
Coding Frame 1
Product Name
rare lipoprotein A
Synonyms
Evidence for Translation
Charge (pH 7) 10.61
Kyte-Doolittle Hydrophobicity Value -0.332
Molecular Weight (kDa) 36.0
Isoelectric Point (pI) 9.91

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 349 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001683 (530 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_22290

Human Homologs

References

No references are associated with this feature.