Pseudomonas sp. VLB120, PVLB_21140

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_21140
Name
Replicon chromosome
Genomic location 4652670 - 4654409 (- strand)

Cross-References

RefSeq YP_008765134.1
GI 557224919
Entrez 17498840
INSDC AGZ37007.1
NCBI Locus Tag PVLB_21140
UniParc UPI0003C06D9A
UniProtKB Acc U5VJI6
UniProtKB ID U5VJI6_9PSED
UniRef100 UniRef100_U5VJI6
UniRef50 UniRef50_A0KKR8
UniRef90 UniRef90_Q88PQ3

Product

Feature Type CDS
Coding Frame 1
Product Name
PTS system fructose-specific transporter subunits IIBC
Synonyms
Evidence for Translation
Charge (pH 7) 6.99
Kyte-Doolittle Hydrophobicity Value 0.598
Molecular Weight (kDa) 59.3
Isoelectric Point (pI) 8.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 175 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002106 (521 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_21140

Human Homologs

References

No references are associated with this feature.