Pseudomonas sp. VLB120, PVLB_19580

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_19580
Name
Replicon chromosome
Genomic location 4308195 - 4309295 (- strand)

Cross-References

RefSeq YP_008764824.1
GI 557224609
Entrez 17498529
INSDC AGZ36697.1
NCBI Locus Tag PVLB_19580
UniParc UPI0003C09EE7
UniProtKB Acc U5VIN2
UniProtKB ID U5VIN2_9PSED
UniRef100 UniRef100_U5VIN2
UniRef50 UniRef50_Q4KHJ5
UniRef90 UniRef90_B1JBT0

Product

Feature Type CDS
Coding Frame 1
Product Name
RND family efflux transporter, MFP subunit
Synonyms
Evidence for Translation
Charge (pH 7) 2.19
Kyte-Doolittle Hydrophobicity Value -0.205
Molecular Weight (kDa) 39.5
Isoelectric Point (pI) 8.45

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 455 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000154 (998 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_19580

Human Homologs

References

No references are associated with this feature.