Pseudomonas sp. VLB120, PVLB_19370

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_19370
Name
Replicon chromosome
Genomic location 4256898 - 4257788 (+ strand)

Cross-References

RefSeq YP_008764782.1
GI 557224567
Entrez 17498487
INSDC AGZ36655.1
NCBI Locus Tag PVLB_19370
UniParc UPI0003C06FE5
UniProtKB Acc U5VLQ7
UniProtKB ID U5VLQ7_9PSED
UniRef100 UniRef100_U5VLQ7
UniRef50 UniRef50_B0KSC2
UniRef90 UniRef90_B0KSC2

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 7.74
Kyte-Doolittle Hydrophobicity Value -0.247
Molecular Weight (kDa) 33.5
Isoelectric Point (pI) 8.99

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 479 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002044 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_19370

Human Homologs

References

No references are associated with this feature.