Pseudomonas sp. VLB120, PVLB_19220
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas sp. VLB120
GCF_000494915.1|latest |
| Locus Tag |
PVLB_19220
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 4225560 - 4226624 (- strand) |
Cross-References
| RefSeq | YP_008764752.1 |
| GI | 557224537 |
| EC Number | 2.7.7.7 |
| Entrez | 17498455 |
| NCBI Locus Tag | PVLB_19220 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
DNA polymerase IV
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 0.75 |
| Kyte-Doolittle Hydrophobicity Value | -0.300 |
| Molecular Weight (kDa) | 39638.6 |
| Isoelectric Point (pI) | 7.21 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 519 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000889 (536 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PVLB_19220
Search term: DNA polymerase IV
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
REV1 DNA directed polymerase [Source:HGNC Symbol;Acc:HGNC:14060]
E-value:
2.1e-36
Percent Identity:
28.7
|
References
No references are associated with this feature.