Pseudomonas sp. VLB120, PVLB_17675

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_17675
Name
Replicon chromosome
Genomic location 3902548 - 3903225 (+ strand)

Cross-References

RefSeq YP_008764443.1
GI 557224228
Entrez 17498144
INSDC AGZ36316.1
NCBI Locus Tag PVLB_17675
UniParc UPI0003C07F2F
UniProtKB Acc U5VKX4
UniProtKB ID U5VKX4_9PSED
UniRef100 UniRef100_U5VKX4
UniRef50 UniRef50_Q4KGB4
UniRef90 UniRef90_V6J975

Product

Feature Type CDS
Coding Frame 1
Product Name
two component transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -5.65
Kyte-Doolittle Hydrophobicity Value -0.262
Molecular Weight (kDa) 25.0
Isoelectric Point (pI) 5.37

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 621 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002411 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_17675

Human Homologs

References

No references are associated with this feature.