Pseudomonas sp. VLB120, PVLB_17400

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_17400
Name
Replicon chromosome
Genomic location 3844807 - 3845634 (- strand)

Cross-References

RefSeq YP_008764388.1
GI 557224173
Entrez 17498083
INSDC AGZ36261.1
NCBI Locus Tag PVLB_17400
UniParc UPI0003C0B4CB
UniProtKB Acc U5VKR9
UniProtKB ID U5VKR9_9PSED
UniRef100 UniRef100_U5VKR9
UniRef50 UniRef50_Q88ER1
UniRef90 UniRef90_Q88ER1

Product

Feature Type CDS
Coding Frame 1
Product Name
CheR-type MCP methyltransferase
Synonyms
Evidence for Translation
Charge (pH 7) 7.32
Kyte-Doolittle Hydrophobicity Value -0.259
Molecular Weight (kDa) 31.1
Isoelectric Point (pI) 9.30

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 414 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002280 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_17400

Human Homologs

References

No references are associated with this feature.