Pseudomonas sp. VLB120, PVLB_17390 (flgC)

Gene Feature Overview

Strain	Pseudomonas sp. VLB120 GCF_000494915.1|latest
Locus Tag	PVLB_17390
Name	flgC
Replicon	chromosome
Genomic location	3843565 - 3844008 (- strand)

Cross-References

RefSeq	YP_008764386.1
GI	557224171
Entrez	17498081
INSDC	AGZ36259.1
NCBI Locus Tag	PVLB_17390
UniParc	UPI0003C089C5
UniProtKB Acc	U5VHH2
UniProtKB ID	U5VHH2_9PSED
UniRef100	UniRef100_U5VHH2
UniRef50	UniRef50_Q4K866
UniRef90	UniRef90_Q1I726

Product

Feature Type	CDS
Coding Frame	1
Product Name	flagellar basal body rod protein FlgC
Synonyms
Evidence for Translation
Charge (pH 7)	-4.53
Kyte-Doolittle Hydrophobicity Value	-0.390
Molecular Weight (kDa)	15.9
Isoelectric Point (pI)	4.61

Subcellular localization

Individual Mappings	Localization Confidence PMID Flagellar Note: This is based on PSORTb V3.0 secondary localization prediction Class 3 20472543 Periplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 317 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001040 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PVLB_17390 Search term: flgC Search term: flagellar basal body rod protein FlgC

Human Homologs

References