Pseudomonas sp. VLB120, PVLB_17145

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_17145
Name
Replicon chromosome
Genomic location 3789900 - 3790352 (- strand)

Cross-References

RefSeq YP_008764337.1
GI 557224122
Entrez 17498032
INSDC AGZ36210.1
NCBI Locus Tag PVLB_17145
UniParc UPI0003C08A07
UniProtKB Acc U5VKG7
UniProtKB ID U5VKG7_9PSED
UniRef100 UniRef100_U5VKG7
UniRef50 UniRef50_Q51467
UniRef90 UniRef90_U5VKG7

Product

Feature Type CDS
Coding Frame 1
Product Name
flagellar protein FliO
Synonyms
Evidence for Translation
Charge (pH 7) 3.47
Kyte-Doolittle Hydrophobicity Value 0.431
Molecular Weight (kDa) 15.7
Isoelectric Point (pI) 10.47

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 84 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001362 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_17145

Human Homologs

References

No references are associated with this feature.