Pseudomonas sp. VLB120, PVLB_16535

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_16535
Name
Replicon chromosome
Genomic location 3655853 - 3657277 (+ strand)

Cross-References

RefSeq YP_008764217.1
GI 557224002
Entrez 17497912
INSDC AGZ36090.1
NCBI Locus Tag PVLB_16535
UniParc UPI0003C0B846
UniProtKB Acc U5VK61
UniProtKB ID U5VK61_9PSED
UniRef100 UniRef100_U5VK61
UniRef50 UniRef50_Q9I3G0
UniRef90 UniRef90_Q1ICG4

Product

Feature Type CDS
Coding Frame 1
Product Name
cbb3-type cytochrome c oxidase subunit I
Synonyms
Evidence for Translation
Charge (pH 7) 11.72
Kyte-Doolittle Hydrophobicity Value 0.586
Molecular Weight (kDa) 52.8
Isoelectric Point (pI) 9.43

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 269 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001566 (1638 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_16535

Human Homologs

References

No references are associated with this feature.