Pseudomonas sp. VLB120, PVLB_09920

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_09920
Name
Replicon chromosome
Genomic location 2176427 - 2177758 (+ strand)

Cross-References

RefSeq YP_008762907.1
GI 557222692
Entrez 17496596
INSDC AGZ34780.1
NCBI Locus Tag PVLB_09920
UniParc UPI0003C07CEC
UniProtKB Acc U5VGE1
UniProtKB ID U5VGE1_9PSED
UniRef100 UniRef100_U5VGE1
UniRef50 UniRef50_Q9I358
UniRef90 UniRef90_Q1IFS3

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -9.01
Kyte-Doolittle Hydrophobicity Value -0.215
Molecular Weight (kDa) 50.0
Isoelectric Point (pI) 5.76

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 108 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000078 (854 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_09920

Human Homologs

References

No references are associated with this feature.