Pseudomonas sp. VLB120, PVLB_08315

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_08315
Name
Replicon chromosome
Genomic location 1886422 - 1887399 (+ strand)

Cross-References

RefSeq YP_008762590.1
GI 557222375
Entrez 17496272
INSDC AGZ34463.1
NCBI Locus Tag PVLB_08315
UniParc UPI0003C09978
UniProtKB Acc U5VBR2
UniProtKB ID U5VBR2_9PSED
UniRef100 UniRef100_U5VBR2
UniRef50 UniRef50_A0A0B7DBL0
UniRef90 UniRef90_I7BHB8

Product

Feature Type CDS
Coding Frame 1
Product Name
ErfK/YbiS/YcfS/YnhG family protein
Synonyms
Evidence for Translation
Charge (pH 7) -3.35
Kyte-Doolittle Hydrophobicity Value 0.005
Molecular Weight (kDa) 34.8
Isoelectric Point (pI) 6.17

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 198 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002715 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_08315

Human Homologs

References

No references are associated with this feature.