Pseudomonas sp. VLB120, PVLB_07720

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_07720
Name
Replicon chromosome
Genomic location 1748747 - 1749367 (- strand)

Cross-References

RefSeq YP_008762471.1
GI 557222256
Entrez 17496147
INSDC AGZ34344.1
NCBI Locus Tag PVLB_07720
UniParc UPI0003C0B920
UniProtKB Acc U5VC28
UniProtKB ID U5VC28_9PSED
UniRef100 UniRef100_U5VC28
UniRef50 UniRef50_P24908
UniRef90 UniRef90_U5VC28

Product

Feature Type CDS
Coding Frame 1
Product Name
two component LuxR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 1.41
Kyte-Doolittle Hydrophobicity Value 0.073
Molecular Weight (kDa) 23.1
Isoelectric Point (pI) 8.19

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 621 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000034 (777 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_07720

Human Homologs

References

No references are associated with this feature.