Pseudomonas sp. VLB120, PVLB_07445

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_07445
Name
Replicon chromosome
Genomic location 1673907 - 1675100 (- strand)

Cross-References

RefSeq YP_008762416.1
GI 557222201
Entrez 17496092
INSDC AGZ34289.1
NCBI Locus Tag PVLB_07445
UniParc UPI0003C0B1C9
UniProtKB Acc U5VBX8
UniProtKB ID U5VBX8_9PSED
UniRef100 UniRef100_U5VBX8
UniRef50 UniRef50_Q4KBT4
UniRef90 UniRef90_I7AW06

Product

Feature Type CDS
Coding Frame 1
Product Name
Response regulator receiver modulated diguanylate phosphodiesterase
Synonyms
Evidence for Translation
Charge (pH 7) -3.53
Kyte-Doolittle Hydrophobicity Value -0.009
Molecular Weight (kDa) 44.3
Isoelectric Point (pI) 6.57

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 497 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG014998 (97 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_07445

Human Homologs

References

No references are associated with this feature.