Pseudomonas sp. VLB120, PVLB_04710

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_04710
Name
Replicon chromosome
Genomic location 1072550 - 1074601 (- strand)

Cross-References

RefSeq YP_008761876.1
GI 557221661
Entrez 17495527
INSDC AGZ33749.1
NCBI Locus Tag PVLB_04710
UniParc UPI0003C08FC4
UniProtKB Acc U5VAE0
UniProtKB ID U5VAE0_9PSED
UniRef100 UniRef100_U5VAE0
UniRef50 UniRef50_D7I4A9
UniRef90 UniRef90_T2H1B7

Product

Feature Type CDS
Coding Frame 1
Product Name
diguanylate cyclase/phosphodiesterase
Synonyms
Evidence for Translation
Charge (pH 7) -13.51
Kyte-Doolittle Hydrophobicity Value -0.219
Molecular Weight (kDa) 77.3
Isoelectric Point (pI) 5.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 451 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003960 (524 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_04710

Human Homologs

References

No references are associated with this feature.