Pseudomonas sp. VLB120, PVLB_03900

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_03900
Name
Replicon chromosome
Genomic location 900023 - 900799 (+ strand)

Cross-References

RefSeq YP_008761714.1
GI 557221499
Entrez 17495365
INSDC AGZ33587.1
NCBI Locus Tag PVLB_03900
UniParc UPI0003C07A45
UniProtKB Acc U5V9N3
UniProtKB ID U5V9N3_9PSED
UniRef100 UniRef100_U5V9N3
UniRef50 UniRef50_Q4K5Q5
UniRef90 UniRef90_Q1I4K6

Product

Feature Type CDS
Coding Frame 1
Product Name
oxidoreductase FAD/NAD(P)-binding subunit
Synonyms
Evidence for Translation
Charge (pH 7) -3.06
Kyte-Doolittle Hydrophobicity Value -0.148
Molecular Weight (kDa) 29.1
Isoelectric Point (pI) 5.77

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 300 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004269 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_03900

Human Homologs

References

No references are associated with this feature.