Pseudomonas sp. VLB120, PVLB_03680

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_03680
Name
Replicon chromosome
Genomic location 840957 - 843278 (+ strand)

Cross-References

RefSeq YP_008761670.1
GI 557221455
Entrez 17495316
INSDC AGZ33543.1
NCBI Locus Tag PVLB_03680
UniParc UPI0003C07E33
UniProtKB Acc U5V977
UniProtKB ID U5V977_9PSED
UniRef100 UniRef100_U5V977
UniRef50 UniRef50_Q1I4R0
UniRef90 UniRef90_Q1I4R0

Product

Feature Type CDS
Coding Frame 1
Product Name
penicillin-binding protein 1B
Synonyms
Evidence for Translation
Charge (pH 7) 10.17
Kyte-Doolittle Hydrophobicity Value -0.250
Molecular Weight (kDa) 85.1
Isoelectric Point (pI) 9.44

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 554 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004349 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_03680

Human Homologs

References

No references are associated with this feature.