Pseudomonas sp. VLB120, PVLB_03450

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_03450
Name
Replicon chromosome
Genomic location 787888 - 789015 (+ strand)

Cross-References

RefSeq YP_008761624.1
GI 557221409
Entrez 17495268
NCBI Locus Tag PVLB_03450

Product

Feature Type CDS
Coding Frame 1
Product Name
chaperone protein DnaJ
Synonyms
Evidence for Translation
Charge (pH 7) -0.37
Kyte-Doolittle Hydrophobicity Value -0.538
Molecular Weight (kDa) 40182.6
Isoelectric Point (pI) 6.92

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 635 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004404 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_03450

Human Homologs

Ensembl 110, assembly GRCh38.p14
DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
E-value: 2.5e-27
Percent Identity: 36.4
Ensembl 110, assembly GRCh38.p14
DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
E-value: 2.5e-27
Percent Identity: 36.4
Ensembl 110, assembly GRCh38.p14
DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
E-value: 2.5e-27
Percent Identity: 36.4

References

No references are associated with this feature.