Pseudomonas sp. VLB120, PVLB_01080

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_01080
Name
Replicon chromosome
Genomic location 259818 - 260150 (+ strand)

Cross-References

RefSeq YP_008761153.1
GI 557220938
Entrez 17494794
INSDC AGZ33026.1
NCBI Locus Tag PVLB_01080
UniParc UPI0003C0B370
UniProtKB Acc U5VBJ1
UniProtKB ID U5VBJ1_9PSED
UniRef100 UniRef100_U5VBJ1
UniRef50 UniRef50_Q500B2
UniRef90 UniRef90_Q1I2Z5

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -18.99
Kyte-Doolittle Hydrophobicity Value -1.052
Molecular Weight (kDa) 11.6
Isoelectric Point (pI) 3.84

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 9 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004862 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_01080

Human Homologs

References

No references are associated with this feature.