Pseudomonas sp. VLB120, PVLB_00490

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_00490
Name
Replicon chromosome
Genomic location 108619 - 109524 (+ strand)

Cross-References

RefSeq YP_008761035.1
GI 557220820
Entrez 17494665
INSDC AGZ32908.1
NCBI Locus Tag PVLB_00490
UniParc UPI0003C09B6F
UniProtKB Acc U5V7A0
UniProtKB ID U5V7A0_9PSED
UniRef100 UniRef100_U5V7A0
UniRef50 UniRef50_Q48QH1
UniRef90 UniRef90_Q88RQ0

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 3.63
Kyte-Doolittle Hydrophobicity Value -0.155
Molecular Weight (kDa) 33.7
Isoelectric Point (pI) 8.71

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 518 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000032 (500 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_00490

Human Homologs

References

No references are associated with this feature.