Pseudomonas sp. VLB120, PVLB_00410

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_00410
Name
Replicon chromosome
Genomic location 93037 - 93588 (+ strand)

Cross-References

RefSeq YP_008761019.1
GI 557220804
Entrez 17494649
INSDC AGZ32892.1
NCBI Locus Tag PVLB_00410
UniParc UPI0003C0A076
UniProtKB Acc U5V7H9
UniProtKB ID U5V7H9_9PSED
UniRef100 UniRef100_U5V7H9
UniRef50 UniRef50_A0A085JPA2
UniRef90 UniRef90_B1J427

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA-3-methyladenine glycosylase I
Synonyms
Evidence for Translation
Charge (pH 7) -0.41
Kyte-Doolittle Hydrophobicity Value -0.288
Molecular Weight (kDa) 21.2
Isoelectric Point (pI) 6.77

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 355 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000010 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_00410

Human Homologs

References

No references are associated with this feature.