Pseudomonas sp. VLB120, PVLB_00400 (glyS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_00400
Name
glyS
Replicon chromosome
Genomic location 89954 - 92008 (- strand)

Cross-References

RefSeq YP_008761017.1
GI 557220802
EC Number 6.1.1.14
Entrez 17494647
INSDC AGZ32890.1
NCBI Locus Tag PVLB_00400
UniParc UPI0003C06E6E
UniProtKB Acc U5VB03
UniProtKB ID U5VB03_9PSED
UniRef100 UniRef100_U5VB03
UniRef50 UniRef50_Q4KKR8
UniRef90 UniRef90_Q88RR9

Product

Feature Type CDS
Coding Frame 1
Product Name
glycyl-tRNA ligase subunit beta
Synonyms
Evidence for Translation
Charge (pH 7) -10.90
Kyte-Doolittle Hydrophobicity Value -0.101
Molecular Weight (kDa) 74.9
Isoelectric Point (pI) 5.09

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 403 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000008 (538 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_00400
Search term: glyS

Human Homologs

References

No references are associated with this feature.