Pseudomonas putida LS46, PPUTLS46_025664
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida LS46 - Assembly GCF_000294445.2
GCF_000294445.2|latest |
| Locus Tag |
PPUTLS46_025664
|
| NCBI Locus Tag | PPUTLS46_RS25500 |
| Name |
|
| Replicon | Contig30 |
| Genomic location | 2842 - 5334 (- strand) |
Cross-References
| RefSeq | WP_003255996.1 |
| GI | 489348894 |
| NCBI Locus Tag | PPUTLS46_RS25500 |
| NCBI Old Locus Tag | PPUTLS46_025664 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ligand-gated channel protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -12.15 |
| Kyte-Doolittle Hydrophobicity Value | -0.282 |
| Molecular Weight (kDa) | 90.7 |
| Isoelectric Point (pI) | 5.11 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001486 (1037 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PPUTLS46_025664
Search term: ligand-gated channel protein
|
Human Homologs
References
No references are associated with this feature.