Pseudomonas sp. TKP, U771_06160
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas sp. TKP
GCF_000508205.1|latest |
| Locus Tag |
U771_06160
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 1349939 - 1351414 (- strand) |
Cross-References
| RefSeq | YP_008930789.1 |
| GI | 568138204 |
| Entrez | 17974614 |
| NCBI Locus Tag | U771_06160 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
RNA helicase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 2.82 |
| Kyte-Doolittle Hydrophobicity Value | -0.345 |
| Molecular Weight (kDa) | 54254.0 |
| Isoelectric Point (pI) | 7.75 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 611 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001808 (534 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: U771_06160
Search term: RNA helicase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
8.1e-63
Percent Identity:
38.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
8.1e-63
Percent Identity:
38.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
8.1e-63
Percent Identity:
38.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
8.1e-63
Percent Identity:
38.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
8.1e-63
Percent Identity:
38.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
8.1e-63
Percent Identity:
38.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
8.1e-63
Percent Identity:
38.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
8.1e-63
Percent Identity:
38.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
8.1e-63
Percent Identity:
38.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
8.1e-63
Percent Identity:
38.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
8.1e-63
Percent Identity:
38.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
8.1e-63
Percent Identity:
38.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
8.1e-63
Percent Identity:
38.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
8.1e-63
Percent Identity:
38.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
8.1e-63
Percent Identity:
38.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
8.1e-63
Percent Identity:
38.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
8.1e-63
Percent Identity:
38.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
8.1e-63
Percent Identity:
38.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
8.1e-63
Percent Identity:
38.1
|
References
No references are associated with this feature.