Pseudomonas aeruginosa SCV20265, SCV20265_5394
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa SCV20265
GCF_000510305.1|latest |
| Locus Tag |
SCV20265_5394
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 5737660 - 5739765 (- strand) |
Cross-References
| RefSeq | YP_008984394.1 |
| GI | 568312125 |
| EC Number | 2.7.7.8 |
| Entrez | 18075343 |
| NCBI Locus Tag | SCV20265_5394 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
Polyribonucleotide nucleotidyltransferase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -20.13 |
| Kyte-Doolittle Hydrophobicity Value | -0.070 |
| Molecular Weight (kDa) | 75.4 |
| Isoelectric Point (pI) | 4.81 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 663 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004385 (536 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: SCV20265_5394
Search term: Polyribonucleotide nucleotidyltransferase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166]
E-value:
1.0e-114
Percent Identity:
36.8
|
|
Ensembl
110, assembly
GRCh38.p14
|
polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166]
E-value:
1.0e-114
Percent Identity:
36.8
|
References
No references are associated with this feature.